Virus Details


VHFID157

Host Factor Information

Gene Name MSTO1
HF Protein Name Protein misato homolog 1
HF Function Inhibits viral infection
Uniprot ID Q9BUK6
Protein Sequence View Fasta Sequence
NCBI Gene ID 55154
Host Factor (HF) Name in Paper FLJ10504
Gene synonyms N.A.
Ensemble Gene ID ENSG00000125459
Ensemble Transcript ENST00000245564 [Q9BUK6-1];ENST00000368341 [Q9BUK6-7];ENST00000490743 [Q9BUK6-4]
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0005737, GO:0005741, GO:0007005, GO:0048311,
MINT ID N.A.
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 617619
PANTHER ID N.A.
PDB ID(s) N.A.,
pfam ID PF10644, PF14881,
Drug Bank ID N.A.,
ChEMBL ID N.A.
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Adeno-associated virus 2
Virus Short Name AAV2
Order Unassigned
Virus Family Parvoviridae
Virus Subfamily Parvovirinae
Genus Dependovirus
Species Adeno-associated virus 2
Host Human, vertebrates
Cell Tropism N.A.
Associated Disease Asymptomatic
Mode of Transmission Respiratory, oral droplets
VIPR DB link N.A.
ICTV DB link https://talk.ictvonline.org/ictv-reports/ictv_9th_report/ssdna-viruses-2011/w/ssdna_viruses/151/parvoviridae
Virus Host DB link http://www.genome.jp/virushostdb/view/?virus_lineage=Parvoviridae

Publication Information

Paper Title Genome wide RNAi screening identifies host restriction factors critical for in vivo AAV transduction
Author's Name Miguel Manoa, Rudy Ippodrinoa , Lorena Zentilina , Serena Zacchigna, Mauro Giacca
Journal Name PNAS
Pubmed ID 26305933
Abstract Viral vectors based on the adeno-associated virus (AAV) hold great promise for in vivo gene transfer several unknowns, however, still limit the vectors broader and more efficient application. Here, we report the results of a high-throughput, whole-genome siRNA screening aimed at identifying cellular factors regulating AAV transduction. We identified 1,483 genes affecting vector efficiency more than 4-fold and up to 50-fold, either negatively or positively. Most of these factors have not previously been associated to AAV infection. The most effective siRNAs were independent from the virus serotype or analyzed cell type and were equally evident for single-stranded and self-complementary AAV vectors. A common characteristic of the most effective siRNAs was the induction of cellular DNA damage and activation of a cell cycle checkpoint. This information can be exploited for the development of more efficient AAV-based gene delivery procedures. Administration of the most effective siRNAs identified by the screening to the liver significantly improved in vivo AAV transduction efficiency.
Used Model HeLa, U2OS and MRC5 cell lines
DOI 10.1073/pnas.1503607112