Virus Details


VHFID1925

Host Factor Information

Gene Name GAPDH
HF Protein Name Glyceraldehyde-3-phosphate dehydrogenase
HF Function Required for Dengue Virus infections
Uniprot ID P04406
Protein Sequence View Fasta Sequence
NCBI Gene ID 2597
Host Factor (HF) Name in Paper GAPDH
Gene synonyms GAPD
Ensemble Gene ID ENSG00000111640
Ensemble Transcript ENST00000229239 [P04406-1];ENST00000396858 [P04406-2];ENST00000396859 [P04406-1];ENST00000396861 [P04406-1];ENST00000619601 [P04406-2]
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0000226, GO:0004365, GO:0005634, GO:0005737, GO:0005811, GO:0005829, GO:0005886, GO:0006094, GO:0008017, GO:0010951, GO:0015630, GO:0016020, GO:0016241, GO:0017148, GO:0019828, GO:0030529, GO:0031640, GO:0031965, GO:0031982, GO:0035605, GO:0035606, GO:0042802, GO:0043231, GO:0048471, GO:0050661, GO:0050715, GO:0050821, GO:0050832, GO:0051287, GO:0051402, GO:0051873, GO:0052501, GO:0061621, GO:0061844, GO:0070062, GO:0071346, GO:0097452, GO:0097718,
MINT ID P04406
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 138400
PANTHER ID PTHR10836
PDB ID(s) 1U8F, 1ZNQ, 2FEH, 3GPD, 4WNC, 4WNI,
pfam ID PF02800, PF00044,
Drug Bank ID DB07347, DB02059, DB00157, DB03893,
ChEMBL ID CHEMBL2284
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Dengue virus 2
Virus Short Name DENV 2
Order Unassigned
Virus Family Flaviviridae
Virus Subfamily N.A.
Genus Flavivirus
Species Dengue virus
Host Human, mammals, mosquitoes and ticks
Cell Tropism Phagocytes, hepatocytes
Associated Disease Dengue fever
Mode of Transmission Arthropod bite, mainly mosquitoes
VIPR DB link http://www.viprbrc.org/brc/home.spg?decorator=flavi
ICTV DB link https://talk.ictvonline.org/ictv-reports/ictv_online_report/positive-sense-rna-viruses/w/flaviviridae
Virus Host DB link http://www.genome.jp/virushostdb/view/?virus_lineage=Flaviviridae

Publication Information

Paper Title Moonlighting glycolytic enzyme glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is required for efficient hepatitis C virus and dengue virus infections in human Huh-751 cells
Author's Name Meera Raj, Mary Langley?, Steven J McArthur, François Jean
Journal Name journal of general virology
Pubmed ID 28548037
Abstract Hijacking of cellular biosynthetic pathways by human enveloped viruses is a shared molecular event essential for the viral lifecycle. In this study, the accumulating evidence of the importance of human glyceraldehyde-3-phosphate dehydrogenase (GAPDH) in the host secretory pathway led us to hypothesize that this moonlighting enzyme could play a key role in the lifecycle steps of two important Flaviviridae members, hepatitis C virus (HCV) and dengue virus (DENV). We used short interfering RNA (siRNA)-mediated knockdown of human GAPDH in Huh-7.5.1 cells– both pre- and post-HCV infection– to demonstrate that GAPDH is a host factor for HCV infection. siRNA-induced GAPDH knockdown performed pre-HCV infection inhibits HCV core production in infected cells and leads to a decrease in infectivity of the HCV-infected cell supernatants. siRNA-induced GAPDH knockdown performed post-HCV infection does not have an effect on HCV core abundance in infected cells, but does lead to a decrease in infectivity of the HCV-infected cell supernatants. Exogenous expression of V5-tagged human GAPDH, pre- and post-infection, increases the infectivity of HCV-infected cell supernatants, suggesting a role for GAPDH during HCV post-replication steps. Interestingly, siRNA-induced GAPDH knockdown in HCV replicon-harbouring cells had no effect on viral RNA replication. Importantly, we confirmed the important role of GAPDH in the HCV lifecycle using Huh-7-derived stable GAPDH-knockdown clones. Finally, siRNA-induced GAPDH knockdown inhibits intracellular DENV-2 E glycoprotein production in infected cells. Collectively, our findings suggest that the moonlighting enzyme, GAPDH, is an important host factor for HCV infection, and they support its potential role in the DENV life cycle.
Used Model Huh-7.5.1 cells
DOI 10.1099/jgv.0.000754