Virus Details


VHFID2934

Host Factor Information

Gene Name PPP1R14A
HF Protein Name Protein phosphatase 1 regulatory subunit 14A
HF Function Required for CVB virus infection
Uniprot ID Q96A00
Protein Sequence View Fasta Sequence
NCBI Gene ID 94274
Host Factor (HF) Name in Paper PPP1R14A
Gene synonyms CPI17 PPP1INL
Ensemble Gene ID ENSG00000167641
Ensemble Transcript ENST00000301242 [Q96A00-1];ENST00000347262 [Q96A00-2]
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0004864, GO:0005829, GO:0035690, GO:0042325,
MINT ID Q96A00
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 608153
PANTHER ID PTHR16188
PDB ID(s) N.A.,
pfam ID PF05361,
Drug Bank ID N.A.,
ChEMBL ID N.A.
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Coxsackie B virus
Virus Short Name CV-B
Order Picornavirales
Virus Family Picornaviridae
Virus Subfamily N.A.
Genus Enterovirus
Species Enterovirus B
Host Human, mammals
Cell Tropism The gastrointestinal trac
Associated Disease Coxsackievirus-induced cardiomyopathy
Mode of Transmission Either fecal-oral or respiratory
VIPR DB link https://www.viprbrc.org/brc/home.spg?decorator=picorna
ICTV DB link https://talk.ictvonline.org/ictv-reports/ictv_9th_report/positive-sense-rna-viruses-2011/w/posrna_viruses/234/picornaviridae
Virus Host DB link http://www.genome.jp/virushostdb/view/?virus_lineage=Picornaviridae

Publication Information

Paper Title Comparative RNAi screening reveals host factors involved in enterovirus infection of polarizedendothelial monolayers
Author's Name Carolyn B. Coyne, Rebecca Bozym, Stefanie A. Morosky, Sheri L. Hanna, Amitava Mukherjee, Matthew Tudor, Kwang Sik Kim, and Sara Cherry
Journal Name Cell Host & Microbe
Pubmed ID 21238948
Abstract Enteroviruses, including coxsackievirus B (CVB) and poliovirus (PV), can access the CNS through the blood brain barrier (BBB) endothelium to cause aseptic meningitis. To identify cellular components required for CVB and PV infection of human brain microvascular endothelial cells, an in vitro BBB model, we performed comparative RNAi screens and identified 117 genes that influenced infection. Whereas a large proportion of genes whose depletion enhanced infection (17 of 22) were broadly antienteroviral, only 46 of the 95 genes whose depletion inhibited infection were required by both CVB and PV and included components of cell signaling pathways such as adenylate cyclases. Downregulation of genes including Rab GTPases, Src tyrosine kinases, and tyrosine phosphatases displayed specificity in their requirement for either CVB or PV infection. These findings highlight the pathways hijacked by enteroviruses for entry and replication in the BBB endothelium, a specialized and clinically relevant cell type for these viruses.
Used Model HBMEC and Caco-2 cells
DOI 10.1016/j.chom.2011.01.001