Virus Details


VHFID3836

Host Factor Information

Gene Name PCNA
HF Protein Name Proliferating cell nuclear antigen
HF Function PCNA is important for viral replication and histone deposition
Uniprot ID P12004
Protein Sequence View Fasta Sequence
NCBI Gene ID 5111
Host Factor (HF) Name in Paper PCNA
Gene synonyms N.A.
Ensemble Gene ID ENSG00000132646
Ensemble Transcript ENST00000379143;ENST00000379160
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0000083, GO:0000701, GO:0000723, GO:0000784, GO:0003682, GO:0003684, GO:0005634, GO:0005654, GO:0005657, GO:0005663, GO:0005813, GO:0006266, GO:0006272, GO:0006283, GO:0006296, GO:0006297, GO:0006298, GO:0006977, GO:0007507, GO:0008283, GO:0016567, GO:0016604, GO:0016925, GO:0019899, GO:0019985, GO:0030331, GO:0030337, GO:0030855, GO:0030894, GO:0030971, GO:0031297, GO:0032077, GO:0032139, GO:0032201, GO:0032355, GO:0032405, GO:0033683, GO:0034644, GO:0035035, GO:0042276, GO:0042769, GO:0042802, GO:0043596, GO:0043626, GO:0044849, GO:0045739, GO:0045740, GO:0046686, GO:0070062, GO:0070182, GO:0070301, GO:0070557, GO:0070987, GO:0071548, GO:0097421, GO:1902065, GO:1902990,
MINT ID P12004
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 176740
PANTHER ID PTHR11352:SF0
PDB ID(s) 1AXC, 1U76, 1U7B, 1UL1, 1VYJ, 1VYM, 1W60, 2ZVK, 2ZVL, 2ZVM, 3JA9, 3P87, 3TBL, 3VKX, 3WGW, 4D2G, 4RJF, 4ZTD, 5E0T, 5E0U, 5E0V, 5IY4, 5L7C, 5MAV, 5MLO, 5MLW, 5MOM, 5YCO,
pfam ID PF02747, PF00705,
Drug Bank ID N.A.,
ChEMBL ID CHEMBL2346488
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Human herpesvirus 1
Virus Short Name HSV1
Order Herpesvirales
Virus Family Herpesviridae
Virus Subfamily Alphaherpesvirinae
Genus Simplexvirus
Species Herpes simplex virus 1
Host Human, mammals
Cell Tropism Primary site of infection: epithelial mucosal cells , latency: remains latent in sensory neurons (ganglions)
Associated Disease Skin vesicles or mucosal ulcers, rarely encephalitis and meningitis
Mode of Transmission Contact, saliva
VIPR DB link http://www.viprbrc.org/brc/vipr_allSpecies_search.do?method=SubmitForm&decorator=herpes
ICTV DB link https://talk.ictvonline.org/ictv-reports/ictv_9th_report/dsdna-viruses-2011/w/dsdna_viruses/91/herpesviridae
Virus Host DB link http://www.genome.jp/virushostdb/view/?virus_lineage=Herpesviridae

Publication Information

Paper Title Early nucleosome deposition on, and replication of, HSV DNA requires cell factor PCNA
Author's Name Iryna Sanders, Mark Boyer, and Nigel W. Fraser
Journal Name Journal Of Neurovirology
Pubmed ID 25672886
Abstract Herpes simplex virus (HSV) is a double-stranded DNA virus that can cause lytic infections in epithelial cells of the skin and latent infections in neuronal cells of the peripheral nervous system. After virion attachment to the cell membrane, the capsid enters the cytoplasm and is transported to the nucleus. Following docking at the nuclear pore, the HSV DNA, and contents of the virion, are injected into the nucleus. The viral DNA that enters the nucleus is devoid of histones, but begins to be covered with them soon after entry. The covering of histones, in the form of nucleosomes, reaches a maximum during the early stages of infection and drops off during late infection (after DNA replication). However, during latency, the genome is saturated with nucleosomes. In this study, we examine the role of proliferating cell nuclear antigen (PCNA), a cellular DNA polymerase accessory protein (processivity factor), and cell DNA polymerases in histone deposition during the early stages of HSV infection. Using SiRNA knockdown, and a cytosine arabinoside (araC) chemical inhibitor, we conclude that PCNA is important for viral replication and histone deposition. However, cell DNA polymerases that bind PCNA do not appear to be required for these processes and PCNA does not appear to bind to the viral DNA polymerase (which has its own viral processivity factor).
Used Model Vero cells
DOI 10.1007/s13365-015-0321-7