Virus Details


VHFID3847

Host Factor Information

Gene Name SAMHD1
HF Protein Name Deoxynucleoside triphosphate triphosphohydrolase SAMHD1
HF Function Suppresses the virus replication
Uniprot ID Q9Y3Z3
Protein Sequence View Fasta Sequence
NCBI Gene ID 25939
Host Factor (HF) Name in Paper SAMHD1
Gene synonyms MOP5
Ensemble Gene ID ENSG00000101347
Ensemble Transcript ENST00000262878 [Q9Y3Z3-1]
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0003676, GO:0003723, GO:0004540, GO:0005622, GO:0005634, GO:0005654, GO:0005886, GO:0006203, GO:0006955, GO:0008270, GO:0008832, GO:0009264, GO:0016793, GO:0032567, GO:0042802, GO:0045088, GO:0046061, GO:0051289, GO:0051607, GO:0060337,
MINT ID N.A.
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 606754
PANTHER ID N.A.
PDB ID(s) 2E8O, 3U1N, 4BZB, 4BZC, 4CC9, 4MZ7, 4Q7H, 4QFX, 4QFY, 4QFZ, 4QG0, 4QG1, 4QG2, 4QG4, 4RXO, 4RXP, 4RXQ, 4RXR, 4RXS, 4TNP, 4TNQ, 4TNR, 4TNX, 4TNY, 4TNZ, 4TO0, 4TO1, 4TO2, 4TO3, 4TO4, 4TO5, 4TO6, 4ZWE, 4ZWG, 5AO0, 5AO1, 5AO2, 5AO3, 5AO4,
pfam ID PF01966, PF07647,
Drug Bank ID N.A.,
ChEMBL ID N.A.
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Human herpesvirus 1
Virus Short Name HSV1
Order Herpesvirales
Virus Family Herpesviridae
Virus Subfamily Alphaherpesvirinae
Genus Simplexvirus
Species Herpes simplex virus 1
Host Human, mammals
Cell Tropism Primary site of infection: epithelial mucosal cells , latency: remains latent in sensory neurons (ganglions)
Associated Disease Skin vesicles or mucosal ulcers, rarely encephalitis and meningitis
Mode of Transmission Contact, saliva
VIPR DB link http://www.viprbrc.org/brc/vipr_allSpecies_search.do?method=SubmitForm&decorator=herpes
ICTV DB link https://talk.ictvonline.org/ictv-reports/ictv_9th_report/dsdna-viruses-2011/w/dsdna_viruses/91/herpesviridae
Virus Host DB link http://www.genome.jp/virushostdb/view/?virus_lineage=Herpesviridae

Publication Information

Paper Title Host Factor SAMHD1 Restricts DNA Viruses in Non- Dividing Myeloid Cells
Author's Name Joseph A. Hollenbaugh, Peter Gee, Jonathon Baker, Michele B. Daly, Sarah M. Amie, Jessica Tate, Natsumi Kasai, Yuka Kanemura, Dong-Hyun Kim, Brian M. Ward, Yoshio Koyanagi, Baek Kim
Journal Name PLOS Pathogens
Pubmed ID 23825958
Abstract SAMHD1 is a newly identified anti-HIV host factor that has a dNTP triphosphohydrolase activity and depletes intracellular dNTP pools in non-dividing myeloid cells. Since DNA viruses utilize cellular dNTPs, we investigated whether SAMHD1 limits the replication of DNA viruses in non-dividing myeloid target cells. Indeed, two double stranded DNA viruses, vaccinia and herpes simplex virus type 1, are subject to SAMHD1 restriction in non-dividing target cells in a dNTP dependent manner. Using a thymidine kinase deficient strain of vaccinia virus, we demonstrate a greater restriction of viral replication in non-dividing cells expressing SAMHD1. Therefore, this study suggests that SAMHD1 is a potential innate anti-viral player that suppresses the replication of a wide range of DNA viruses, as well as retroviruses, which infect non-dividing myeloid cells.
Used Model Primary human monocytes cells
DOI 10.1371/journal.ppat.1003481