Virus Details


VHFID4982

Host Factor Information

Gene Name APOE
HF Protein Name Apolipoprotein E
HF Function Essential viral infection
Uniprot ID P02649
Protein Sequence View Fasta Sequence
NCBI Gene ID 348
Host Factor (HF) Name in Paper heparan sulfate (HS)
Gene synonyms N.A.
Ensemble Gene ID ENSG00000130203
Ensemble Transcript ENST00000252486
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0000302, GO:0001523, GO:0001540, GO:0001937, GO:0002021, GO:0005198, GO:0005319, GO:0005543, GO:0005576, GO:0005615, GO:0005634, GO:0005737, GO:0005769, GO:0005783, GO:0005788, GO:0005794, GO:0005886, GO:0006357, GO:0006641, GO:0006707, GO:0006874, GO:0006898, GO:0007010, GO:0007186, GO:0007263, GO:0007271, GO:0007616, GO:0008201, GO:0008203, GO:0008289, GO:0010544, GO:0010873, GO:0010875, GO:0010877, GO:0010976, GO:0010977, GO:0015485, GO:0015909, GO:0016020, GO:0016209, GO:0017038, GO:0017127, GO:0019068, GO:0019433, GO:0019934, GO:0030195, GO:0030425, GO:0030516, GO:0030669, GO:0030828, GO:0031012, GO:0031102, GO:0032269, GO:0032462, GO:0032489, GO:0032805, GO:0033344, GO:0033700, GO:0034361, GO:0034362, GO:0034363, GO:0034364, GO:0034365, GO:0034371, GO:0034372, GO:0034374, GO:0034375, GO:0034378, GO:0034380, GO:0034382, GO:0034384, GO:0034447, GO:0035641, GO:0042158, GO:0042159, GO:0042311, GO:0042627, GO:0042632, GO:0042802, GO:0042803, GO:0042982, GO:0043025, GO:0043407, GO:0,
MINT ID P02649
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 104310
PANTHER ID N.A.
PDB ID(s) 1B68, 1BZ4, 1EA8, 1GS9, 1H7I, 1LE2, 1LE4, 1LPE, 1NFN, 1NFO, 1OEF, 1OEG, 1OR2, 1OR3, 2KC3, 2KNY, 2L7B,
pfam ID PF01442,
Drug Bank ID DB00062, DB00064,
ChEMBL ID N.A.
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Human papillomavirus type 16
Virus Short Name HPV16
Order Unassigned
Virus Family Papillomaviridae
Virus Subfamily N.A.
Genus Alphapapillomavirus
Species Human papillomavirus 16
Host Human, monkeys
Cell Tropism Epithelial cells of skin, mucous membranes
Associated Disease Malignant tumours
Mode of Transmission Sexual, indirect and direct contact, auto-inoculation
VIPR DB link N.A.
ICTV DB link https://talk.ictvonline.org/ictv-reports/ictv_9th_report/dsdna-viruses-2011/w/dsdna_viruses/121/papillomaviridae
Virus Host DB link http://www.genome.jp/virushostdb/view/?virus_lineage=Papillomaviridae

Publication Information

Paper Title Interaction of human papillomavirus type 16 particles with heparan sulfate and syndecan-1 molecules in the keratinocyte extracellular matrix plays an active role in infection
Author's Name Zurab Surviladze, Rosa T. Sterkand and Michelle A. Ozbun
Journal Name Journal Of General Virology
Pubmed ID 26289843
Abstract Oncogenic human papillomaviruses (HPVs) attach predominantly to extracellular matrix (ECM) components during infection of cultured keratinocytes and in the rodent vaginal challenge model in vivo. However, the mechanism of virion transfer from the ECM to receptors that mediate entry into host cells has not been determined. In this work we strove to assess the role of heparan sulfate (HS) chains in HPV16 binding to the ECM and determine how HPV16 release from the ECM is regulated. We also assessed the extent to which capsids released from the ECM are infectious. We show that a large fraction of HPV16 particles binds to the ECM via HS chains, and that syndecan-1 (snd-1) molecules present in the ECM are involved in virus binding. Inhibiting the normal processing of snd-1 and HS molecules via matrix metalloproteinases and heparanase dramatically reduces virus release from the ECM, cellular uptake and infection. Conversely, exogenous heparinase activates each of these processes. We confirm that HPV16 released from the ECM is infectious in keratinocytes. Use of a specific inhibitor shows furin is not involved in HPV16 release from ECM attachment factors and corroborates other studies showing only the intracellular activity of furin is responsible for modulating HPV infectivity. These data suggest that our recently proposed model, describing the action of HS proteoglycan processing enzymes in releasing HPV16 from the cell surface in complex with the attachment factor snd-1, is also relevant to the release of HPV16 particles from the ECM to promote efficient infection of keratinocytes.
Used Model HaCaT cells
DOI 10.1099/vir.0.000147