Virus Details


VHFID4990

Host Factor Information

Gene Name BRCA1
HF Protein Name Breast cancer type 1 susceptibility protein
HF Function Essential viral replication
Uniprot ID P38398
Protein Sequence View Fasta Sequence
NCBI Gene ID 672
Host Factor (HF) Name in Paper BRCA1
Gene synonyms RNF53
Ensemble Gene ID ENSG00000012048
Ensemble Transcript ENST00000352993 [P38398-5];ENST00000357654 [P38398-1];ENST00000461221 [P38398-2];ENST00000461798 [P38398-2];ENST00000468300 [P38398-6];ENST00000471181 [P38398-7];ENST00000491747 [P38398-3];ENST00000493795 [P38398-8]
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0000151, GO:0000724, GO:0000729, GO:0000731, GO:0000732, GO:0000800, GO:0001105, GO:0003677, GO:0003684, GO:0003713, GO:0003723, GO:0004842, GO:0005634, GO:0005654, GO:0005694, GO:0005737, GO:0005886, GO:0006260, GO:0006301, GO:0006302, GO:0006303, GO:0006349, GO:0006357, GO:0006359, GO:0006633, GO:0006915, GO:0006974, GO:0006978, GO:0007059, GO:0007098, GO:0008270, GO:0008274, GO:0008630, GO:0009048, GO:0010212, GO:0010575, GO:0010628, GO:0015631, GO:0016567, GO:0016579, GO:0019899, GO:0030521, GO:0030529, GO:0031398, GO:0031436, GO:0031625, GO:0032991, GO:0033147, GO:0035066, GO:0035067, GO:0042127, GO:0042981, GO:0043009, GO:0043627, GO:0044030, GO:0044212, GO:0044818, GO:0045717, GO:0045739, GO:0045766, GO:0045892, GO:0045893, GO:0045944, GO:0046600, GO:0050681, GO:0051571, GO:0051572, GO:0051573, GO:0051574, GO:0051865, GO:0070063, GO:0070317, GO:0070512, GO:0070531, GO:0071158, GO:0071356, GO:0071681, GO:0072425, GO:0085020, GO:1901796, GO:1902042, GO:2000378, GO:2000617, GO:2,
MINT ID P38398
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 113705
PANTHER ID PTHR13763;PTHR13763:SF0
PDB ID(s) 1JM7, 1JNX, 1N5O, 1OQA, 1T15, 1T29, 1T2U, 1T2V, 1Y98, 2ING, 3COJ, 3K0H, 3K0K, 3K15, 3K16, 3PXA, 3PXB, 3PXC, 3PXD, 3PXE, 4IFI, 4IGK, 4JLU, 4OFB, 4U4A, 4Y18, 4Y2G,
pfam ID PF00533, PF12820, PF00097,
Drug Bank ID N.A.,
ChEMBL ID CHEMBL5990
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Human Papillomavirus 31
Virus Short Name HPV31
Order Unassigned
Virus Family Papillomaviridae
Virus Subfamily N.A.
Genus Alphapapillomavirus
Species Human papillomavirus 16
Host Human, monkeys
Cell Tropism Epithelial cells of skin, mucous membranes
Associated Disease Malignant tumours
Mode of Transmission Sexual, indirect and direct contact, auto-inoculation
VIPR DB link N.A.
ICTV DB link https://talk.ictvonline.org/ictv-reports/ictv_9th_report/dsdna-viruses-2011/w/dsdna_viruses/121/papillomaviridae
Virus Host DB link http://www.genome.jp/virushostdb/view/?virus_lineage=Papillomaviridae

Publication Information

Paper Title Homologous Recombination Repair Factors Rad51 and BRCA1 Are Necessary for ProductiveReplication of Human Papillomavirus 32
Author's Name William H. Chappell, Dipendra Gautam, Suzan T. Ok, Bryan A. Johnson, Daniel C. Anacker, Cary A. Moody
Journal Name Journal Of Virology
Pubmed ID 26699641
Abstract High-risk human papillomavirus 31 (HPV31)-positive cells exhibit constitutive activation of the ATM-dependent DNA damage response (DDR), which is necessary for productive viral replication. In response to DNA double-strand breaks (DSBs), ATM activation leads to DNA repair through homologous recombination (HR), which requires the principal recombinase protein Rad51, as well as BRCA1. Previous studies from our lab demonstrated that Rad51 and BRCA1 are expressed at high levels in HPV31-positive cells and localize to sites of viral replication. These results suggest that HPV may utilize ATM activity to increase HR activity as a means to facilitate viral replication. In this study, we demonstrate that high-risk HPV E7 expression alone is sufficient for the increase in Rad51 and BRCA1 protein levels. We have found that this increase occurs, at least in part, at the level of transcription. Studies analyzing protein stability indicate that HPV may also protect Rad51 and BRCA1 from turnover, contributing to the overall increase in cellular levels. We also demonstrate that Rad51 is bound to HPV31 genomes, with binding increasing per viral genome upon productive replication. We have found that depletion of Rad51 and BRCA1, as well as inhibition of Rad51s recombinase activity, abrogates productive viral replication upon differentiation. Overall, these results indicate that Rad51 and BRCA1 are required for the process of HPV31 genome amplification and suggest that productive replication occurs in a manner dependent upon recombination.
Used Model CIN612 9E, HFK-31, HFK31-E6, HFK31-E7, HFK31-E6E7, and HFK31/DR-GFP
DOI 10.1128/JVI.02495-15