Virus Details


VHFID5120

Host Factor Information

Gene Name LDLR
HF Protein Name Low-density lipoprotein receptor
HF Function Cellular receptors for VSV
Uniprot ID P01130
Protein Sequence View Fasta Sequence
NCBI Gene ID 3949
Host Factor (HF) Name in Paper LDLR
Gene synonyms N.A.
Ensemble Gene ID ENSG00000130164
Ensemble Transcript ENST00000455727 [P01130-3];ENST00000535915 [P01130-4];ENST00000545707 [P01130-2];ENST00000558013 [P01130-5];ENST00000558518 [P01130-1]
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0001540, GO:0001618, GO:0002020, GO:0005041, GO:0005509, GO:0005622, GO:0005764, GO:0005769, GO:0005770, GO:0005794, GO:0005886, GO:0005887, GO:0005905, GO:0006629, GO:0006897, GO:0006898, GO:0007616, GO:0008203, GO:0009897, GO:0009986, GO:0010008, GO:0010628, GO:0010629, GO:0010867, GO:0010899, GO:0010986, GO:0015914, GO:0016020, GO:0016323, GO:0030169, GO:0030229, GO:0030299, GO:0030301, GO:0030669, GO:0032050, GO:0034362, GO:0034381, GO:0034382, GO:0034383, GO:0036020, GO:0036477, GO:0042159, GO:0042632, GO:0042802, GO:0043235, GO:0045177, GO:0045807, GO:0050729, GO:0051246, GO:0051248, GO:0061024, GO:0061771, GO:0061889, GO:0070508, GO:0071398, GO:0071404, GO:0090118, GO:0090181, GO:0097242, GO:0097443, GO:1900223, GO:1903979, GO:1905167, GO:1905907, GO:1990666, GO:2000188,
MINT ID P01130
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 143890
PANTHER ID N.A.
PDB ID(s) 1AJJ, 1D2J, 1F5Y, 1F8Z, 1HJ7, 1HZ8, 1I0U, 1IJQ, 1LDL, 1LDR, 1LRX, 1N7D, 1XFE, 2FCW, 2KRI, 2LGP, 2M7P, 2MG9, 2W2M, 2W2N, 2W2O, 2W2P, 2W2Q, 3BPS, 3GCW, 3GCX, 3M0C, 3P5B, 3P5C, 3SO6, 4NE9,
pfam ID PF07645, PF00057, PF00058,
Drug Bank ID DB00707,
ChEMBL ID CHEMBL3311
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Vesicular stomatitis Indiana virus
Virus Short Name VSV
Order Mononegavirales
Virus Family Rhabdoviridae
Virus Subfamily N.A.
Genus Vesiculovirus
Species Indiana vesiculovirus
Host Human, cattle, horse, swine, sandflies, blackflies
Cell Tropism N.A.
Associated Disease Vesicular diseases, encephalitis
Mode of Transmission Mostely by sandflies
VIPR DB link https://www.viprbrc.org/brc/vipr_allSpecies_search.spg?method=SubmitForm&decorator=rhabdo
ICTV DB link https://talk.ictvonline.org/ictv-reports/ictv_9th_report/negative-sense-rna-viruses-2011/w/negrna_viruses/201/rhabdoviridae
Virus Host DB link N.A.

Publication Information

Paper Title LDL receptor and its family members serve as the cellular receptors for vesicular stomatitis virus
Author's Name Danit Finkelshtein, Ariel Werman, Daniela Novick, Sara Barak, and Menachem Rubinstein
Journal Name PNAS
Pubmed ID 23589850
Abstract Vesicular stomatitis virus (VSV) exhibits a remarkably robust and pantropic infectivity, mediated by its coat protein, VSV-G. Using this property, recombinant forms of VSV and VSV-G-pseudotyped viral vectors are being developed for gene therapy, vaccination, and viral oncolysis and are extensively used for gene transduction in vivo and in vitro. The broad tropism of VSV suggests that it enters cells through a highly ubiquitous receptor, whose identity has so far remained elusive. Here we show that the LDL receptor (LDLR) serves as the major entry port of VSV and of VSV-G-pseudotyped lentiviral vectors in human and mouse cells, whereas other LDLR family members serve as alternative receptors. The widespread expression of LDLR family members accounts for the pantropism of VSV and for the broad applicability of VSV-G-pseudotyped viral vectors for gene transduction.
Used Model GM701 and CHO cells
DOI 10.1073/pnas.1214441110