Virus Details


VHFID6648

Host Factor Information

Gene Name ADAR
HF Protein Name Double-stranded RNA-specific adenosine deaminase
HF Function ADAR1 is a proviral and anti-apoptotic host factor in the context of measles virus infection
Uniprot ID P55265
Protein Sequence View Fasta Sequence
NCBI Gene ID 103
Host Factor (HF) Name in Paper ADAR1
Gene synonyms ADAR1 DSRAD G1P1 IFI4
Ensemble Gene ID ENSG00000160710
Ensemble Transcript ENST00000368471 [P55265-5];ENST00000368474 [P55265-1]
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0001649, GO:0001701, GO:0002244, GO:0002566, GO:0003677, GO:0003723, GO:0003726, GO:0005634, GO:0005654, GO:0005730, GO:0005737, GO:0006382, GO:0006397, GO:0006606, GO:0006611, GO:0009615, GO:0016020, GO:0016553, GO:0030218, GO:0031054, GO:0035280, GO:0035455, GO:0043066, GO:0044387, GO:0044530, GO:0045070, GO:0045071, GO:0045087, GO:0046872, GO:0051607, GO:0060216, GO:0060337, GO:0060339, GO:0061484, GO:0098586, GO:1900369,
MINT ID P55265
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 127400
PANTHER ID N.A.
PDB ID(s) 1QBJ, 1QGP, 1XMK, 2ACJ, 2GXB, 2L54, 2MDR, 3F21, 3F22, 3F23, 3IRQ, 3IRR,
pfam ID PF02137, PF00035, PF02295,
Drug Bank ID N.A.,
ChEMBL ID N.A.
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Measles Virus
Virus Short Name MeV
Order Mononegavirales
Virus Family Paramyxoviridae
Virus Subfamily N.A.
Genus Morbilivirus
Species Measles morbillivirus
Host Human, dog, cattle
Cell Tropism N.A.
Associated Disease Fever, rash
Mode of Transmission Respiratory
VIPR DB link http://www.viprbrc.org/brc/vipr_allSpecies_search.do?method=SubmitForm&decorator=paramyxo
ICTV DB link https://talk.ictvonline.org/ictv-reports/ictv_9th_report/negative-sense-rna-viruses-2011/w/negrna_viruses/199/paramyxoviridae
Virus Host DB link http://www.genome.jp/virushostdb/view/?virus_lineage=Paramyxoviridae

Publication Information

Paper Title RNA-specific adenosine deaminase ADAR1 suppresses measles virus-induced apoptosis and activation of protein kinase PKR
Author's Name Ann M. Toth, Zhiqun Li, Roberto Cattaneo and Charles E. Samuel
Journal Name The Journal Of Biological Chemistry
Pubmed ID 19710021
Abstract ADAR1 (adenosine deaminase acting on RNA) catalyzes the conversion of adenosine to inosine, a process known as A-to-I editing. Extensive A-to-I editing has been described in viral RNAs isolated from the brains of patients persistently infected with measles virus, although the precise role of ADAR during measles virus infection remains unknown. We generated human HeLa cells stably deficient in ADAR1 ("ADAR1(kd) cells") through short hairpin RNA-mediated knockdown, and using these cells, we tested the effect of ADAR1 deficiency on measles virus (MVvac strain) growth and virus-induced cell death. We found that the growth of mutant viruses lacking expression of the viral accessory proteins V and C (V(ko) and C(ko), respectively) was decreased in ADAR1-deficient cells compared with ADAR1-sufficient cells. In addition, apoptosis was enhanced in ADAR1-deficient cells following infection with wild type and V(ko) virus but not following infection with C(ko) virus or treatment with tumor necrosis factor-alpha or staurosporine. Furthermore, in C(ko)-infected ADAR1-sufficient cells when ADAR1 did not protect against apoptosis, caspase cleavage of the ADAR1 p150 protein was detected. Finally, enhanced apoptosis in ADAR1(kd) cells following infection with wild type and V(ko) virus correlated with enhanced activation of PKR kinase and interferon regulatory factor IRF-3. Taken together, these results demonstrate that ADAR1 is a proviral, antiapoptotic host factor in the context of measles virus infection and suggest that the antiapoptotic activity of ADAR1 is achieved through suppression of activation of proapoptotic and double-stranded RNA-dependent activities, as exemplified by PKR and IRF-3.
Used Model HeLa and Vero cells
DOI 10.1074/jbc.M109.045146